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Scientific Computing scripts

GENtle

GENtle is a software for DNA and amino acid editing, database management, plasmid maps, restriction and ligation, alignments, sequencer data import, calculators, gel image display, PCR, and much more. ...

tkFP

This program allows you to manage clinical medical records. It is designed for Family Physicians, Pediatricians, Internists or Primary Care and is network enabled.It has Tk GUI and web browser based interfaces. ...
Python

PyEphem

PyEphem provides scientific-grade astronomical computations for the Python programming language. Given a date and location on the Earth's surface, it can compute the positions of the Sun and Moon, of the planets and their moons, and of any asteroids, comets, or earth satellites whose orbital elements the user can provide.Additional ...
Python

Extended great common divisor function

This script contains a function that finds out the gcd(a,b)(great common divisor of a and b) as a linear conbination of a anb b, ax by=gcd(a,b). ...
Python

Arrayterator

... slices and a copy() method, like variables from Scientific.IO.NetCDF, pynetcdf and numpy.ariables frbr >/ ...
Python

Weighted choice

... that any probability distributions can be sampled by computing the cumulative distribution, drawing a random number from 0 to 1, and finding the x-value where that number is attained on the cumulative distribution. The searchsorted(..) function performs this search. This script return random samples of cumulative vector (1-D numpy array) ...
Python

Computing permutations with duplicates

This script handles duplicate values in a list. It could easily be made a generator, and it does not require recursion. ...
Python

Discrete Event Calculus Reasoner

The Discrete Event Calculus Reasoner is an open source program for performing automated commonsense reasoning using the event calculus, a comprehensive and highly usable logic-based formalism. It solves problems efficiently by converting them into satisfiability (SAT) problems. Features: - Comes with 99 examples - Comes with 13-page user's manual ...

Bc Language

bc is a language that supports arbitrary precision numbers with interactive execution of statements. There are some similarities in the syntax to the C programming language.A standard math library is available by command line option. If requested, the math library is defined before processing any files. bc starts by processing code ...

Gpiv

Gpiv is a graphic user interface program for recording and analyzing images obtained from a fluid flow that has been seeded with tracer particles by the so-called Particle Image Velocimetry technique (PIV).The program allows to have a quick overview of the parameter settings of all processes, easily changing them, executing the ...

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