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Molecular Dynamics Simulation scripts

The Python Macromolecular Library

... data structure describing biological macromolecules, and an OpenGL molecular viewer. The mmLib data model is designed to provide easy access to the various levels of detail needed to implement high-level application programs for macromolecular crystallography, NMR, modeling, and visualization. This includes specialized classes for proteins, DNA, amino acids, and nucleic ...
Python
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MODEL

MODEL is a numeric simulation library written to simulate systems of rate equations describing Vertical Cavity Surface Emitting Lasers (VCSELs). Features: - deterministic integration of any system of well-behaved differential equations. - stochastic integration of these systems, with the possibility of specifying the correlations present in the noise ...
C/C++
MODEL downloadDownload

Wolfram style cellular automata

This is a little script that uses Python to generate the cellular automata that Wolfram discusses in his book "A New Kind of Scilfram disquot;.The script uses the Python Imaging Library to render the output, but you could replace this with text or any other method of visualization. ...
Python
Wolfram style cellular automata downloadDownload

Turing Machine Simulator

Turing Machine Simulator allows an arbitrary machine to be loaded. Words (represented as strings) can be ran against the simulator producing a response: Accept or Crash. ...
Python
Turing Machine Simulator downloadDownload

Gnome Flow

Gnome Flow is a program written to calculate and visualize simple steady state fluid flows. It uses the relaxation method, and can calculate flows past symmetric objects.Steady state means, that it calculates the flow at a given time, and that the physical parameters are constant in time. Requirements: · gnomelibs ...
C/C++
Gnome Flow downloadDownload

Faces Script

Faces is a powerful and free project management tool. faces stands for flexible, automated, calculating, extendible, simulating. It is based on python, an easy to learn and powerful programming language. ...
Python
Faces Script downloadDownload

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