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Data Clusterization Python scripts

Implementation of sets using sorted lists

... set operations using sorted lists as the underlying data structure. Advantages: - Space savings -- lists ... - Fast operations depending on the underlying data patterns. - Non-overlapping sets get united, intersected, or differenced with only log(N) element comparisons.Results are built using fast-slicing. - Algorithms are designed ...
Python
Implementation of sets using sorted lists downloadDownload

The Python Macromolecular Library

... library of atomic elements and monomers, an object-oriented data structure describing biological macromolecules, and an OpenGL molecular viewer. The mmLib data model is designed to provide easy access to the various levels of detail needed to implement high-level application programs for macromolecular crystallography, NMR, modeling, ...
Python
The Python Macromolecular Library downloadDownload

NumPy

... used as an efficient multi-dimensional container of generic data. Arbitrary data-types can be defined. This allows NumPy to seamlessly and speedily integrate with a wide-variety of databases. NumPy derives from the old Numeric code base ...
Python
NumPy downloadDownload

cfv tool

... to ensure the correct retrieval or storage of data. cfv is written in python, and as such should run on all platforms python supports. Currently, it has been verified to work on linux, freebsd, openbsd, netbsd, solaris, macosx, and windows. Features: - supports testing and creating of .sfv, .csv(2, 3, ...
Python
cfv tool downloadDownload

z directory

... and paster. Pickled Directory objects will contain all data from a directory at path and can be saved in other locations.Once a Directory object has been created, pasting it to another location is ex has beenimple. ...
Python
z directory downloadDownload

Merge sorted sequences

... will run a C speed merge on the data. So, all that is involved is concatenating the sequences and running a sort. ...
Python
Merge sorted sequences downloadDownload

min max peaks with Numeric

... and max for each block, the so-called "peaks data". ...
Python
min max peaks with Numeric downloadDownload

Printing of Database Cursor Contents

One of the problems of dealing with databases is presenting the result of a query when you may not know much about the data. This script uses the cursor's description attribute to try and provide appropriate headings, and optionally examines each output row to ensure column widths are adequate. ...
Python
Printing of Database Cursor Contents downloadDownload

Improved TemporaryFile

This script allows a temporary file implementation that uses memory unless either capacity is breached or fileno is requested, at which point a real temporary file will be created and the relevant details returned. ...
Python
Improved TemporaryFile downloadDownload

OpenMAD

... conflicts in a virtual environment and provide detailed data during all stages of simulation. Requirements: · MySQL server, · Python, · MySQLdb (Python API module) ...
Python
OpenMAD downloadDownload

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